FastQCFastQC Report
Mon 25 Mar 2013
105.fq

Summary

[OK] Basic Statistics

Measure Value
Filename 105.fq
File type Conventional base calls
Encoding Illumina 1.5
Total Sequences 40120991
Filtered Sequences 0
Sequence length 49
%GC 50

[OK] Per base sequence quality

Per base quality graph

[OK] Per sequence quality scores

Per Sequence quality graph

[FAIL] Per base sequence content

Per base sequence content

[FAIL] Per base GC content

Per base GC content graph

[WARN] Per sequence GC content

Per sequence GC content graph

[OK] Per base N content

N content graph

[OK] Sequence Length Distribution

Sequence length distribution

[FAIL] Sequence Duplication Levels

Duplication level graph

[FAIL] Overrepresented sequences

Sequence Count Percentage Possible Source
TTCAAGTAATCCAGGATAGGCTTGGAATTCTCGGGTGCCAAGGAACTCC 2234981 5.570602680277763 RNA PCR Primer, Index 1 (100% over 27bp)
AACATTCAACGCTGTCGGTGAGTTGGAATTCTCGGGTGCCAAGGAACTC 1548310 3.8591020844923793 RNA PCR Primer, Index 1 (100% over 26bp)
AAGCTGCCAGTTGAAGAACTGTTGGAATTCTCGGGTGCCAAGGAACTCC 1447148 3.6069597582970974 RNA PCR Primer, Index 1 (100% over 27bp)
CATAAAGTAGAAAGCACTACTTGGAATTCTCGGGTGCCAAGGAACTCCA 1319434 3.2886376111696745 RNA PCR Primer, Index 1 (100% over 28bp)
CAACGGAATCCCAAAAGCAGCTGTGGAATTCTCGGGTGCCAAGGAACTC 1079223 2.689921093923129 RNA PCR Primer, Index 1 (100% over 26bp)
TGAGGTAGTAGATTGTATAGTTTGGAATTCTCGGGTGCCAAGGAACTCC 1070473 2.668112061339661 RNA PCR Primer, Index 1 (100% over 27bp)
TCTCCCAACCCTTGTACCAGTGTGGAATTCTCGGGTGCCAAGGAACTCC 984222 2.4531348191274738 RNA PCR Primer, Index 1 (100% over 27bp)
AACATTCAACGCTGTCGGTGAGTGGAATTCTCGGGTGCCAAGGAACTCC 945755 2.357257326968818 RNA PCR Primer, Index 1 (100% over 27bp)
TAGCTTATCAGACTGATGTTGATGGAATTCTCGGGTGCCAAGGAACTCC 538500 1.3421901767082474 RNA PCR Primer, Index 1 (100% over 27bp)
TATTGCACTTGTCCCGGCCTGTTGGAATTCTCGGGTGCCAAGGAACTCC 501528 1.2500389135452812 RNA PCR Primer, Index 1 (100% over 27bp)
TAGCTTATCAGACTGATGTTGACTTGGAATTCTCGGGTGCCAAGGAACT 486552 1.2127118196058517 RNA PCR Primer, Index 1 (100% over 25bp)
TTCAAGTAATTCAGGATAGGTTTGGAATTCTCGGGTGCCAAGGAACTCC 434704 1.0834827085901242 RNA PCR Primer, Index 1 (100% over 27bp)
TAGCTTATCAGACTGATGTTGACTGGAATTCTCGGGTGCCAAGGAACTC 425445 1.0604050134255159 RNA PCR Primer, Index 1 (100% over 26bp)
TCTCCCAACCCTTGTACCAGTGTTGGAATTCTCGGGTGCCAAGGAACTC 423353 1.0551907852924172 RNA PCR Primer, Index 1 (100% over 26bp)
TGTAAACATCCTTGACTGGAAGCTTGGAATTCTCGGGTGCCAAGGAACT 415833 1.0364474795749687 RNA PCR Primer, Index 1 (100% over 25bp)
TGAGGTAGTAGATTGTATAGTTGGAATTCTCGGGTGCCAAGGAACTCCA 388255 0.9677103937936129 RNA PCR Primer, Index 1 (100% over 28bp)
GGCTGGTCCGATGGTAGTGGGTTACCAGAACTTGGAATTCTCGGGTGCC 381117 0.949919208127237 No Hit
TCTCCCAACCCTTGTACCAGTTGGAATTCTCGGGTGCCAAGGAACTCCA 375016 0.9347127043796102 RNA PCR Primer, Index 1 (100% over 28bp)
TTCACAGTGGCTAAGTTCTGTGGAATTCTCGGGTGCCAAGGAACTCCAG 367353 0.9156129767582261 RNA PCR Primer, Index 1 (100% over 29bp)
TCAGTGCACTACAGAACTTTGTTGGAATTCTCGGGTGCCAAGGAACTCC 309788 0.7721344669676778 RNA PCR Primer, Index 1 (100% over 27bp)
TAGCAGCACGTAAATATTGGCGTGGAATTCTCGGGTGCCAAGGAACTCC 307087 0.7654023301667698 RNA PCR Primer, Index 1 (100% over 27bp)
CAAAGAATTCTCCTTTTGGGCTTGGAATTCTCGGGTGCCAAGGAACTCC 269428 0.6715387463883931 RNA PCR Primer, Index 1 (100% over 27bp)
AACATTCAACGCTGTCGGTGATGGAATTCTCGGGTGCCAAGGAACTCCA 253923 0.632893140650489 RNA PCR Primer, Index 1 (100% over 28bp)
TTCAAGTAATCCAGGATAGGCTTTGGAATTCTCGGGTGCCAAGGAACTC 245840 0.6127465794650985 RNA PCR Primer, Index 1 (100% over 26bp)
TATTGCACTTGTCCCGGCCTGTATTGGAATTCTCGGGTGCCAAGGAACT 232101 0.5785026596177547 RNA PCR Primer, Index 1 (100% over 25bp)
CATTGCACTTGTCTCGGTCTGATGGAATTCTCGGGTGCCAAGGAACTCC 230851 0.5753870835344023 RNA PCR Primer, Index 1 (100% over 27bp)
TGTAAACATCCCCGACTGGAAGCTTGGAATTCTCGGGTGCCAAGGAACT 228992 0.5707535987832404 RNA PCR Primer, Index 1 (100% over 25bp)
CCCCCCACTGCTAAATTTGACTGGCTTTGGAATTCTCGGGTGCCAAGGA 227510 0.5670597717788177 RNA PCR Primer, Index 1 (100% over 22bp)
TGAGGTAGTAGGTTGTATAGTTTGGAATTCTCGGGTGCCAAGGAACTCC 226100 0.5635454019567961 RNA PCR Primer, Index 1 (100% over 27bp)
TCTCCCAACCCTTGTACCAGTGATGGAATTCTCGGGTGCCAAGGAACTC 220841 0.5504375502589156 RNA PCR Primer, Index 1 (100% over 26bp)
TGAGGTAGTAGTTTGTGCTGTTTGGAATTCTCGGGTGCCAAGGAACTCC 206098 0.5136911997014232 RNA PCR Primer, Index 1 (100% over 27bp)
TCGAGGAGCTCACAGTCTAGTTGGAATTCTCGGGTGCCAAGGAACTCCA 198168 0.49392598502863494 RNA PCR Primer, Index 1 (100% over 28bp)
TTCGGAGGATGGCTCATCAAGTGGAATTCTCGGGTGCCAAGGAACTCCA 169161 0.42162717266879074 RNA PCR Primer, Index 1 (100% over 28bp)
TATTGCACTTGTCCCGGCCTGTAATGGAATTCTCGGGTGCCAAGGAACT 164675 0.4104459932208554 RNA PCR Primer, Index 1 (100% over 25bp)
TTCAAGTAATCCAGGATAGGCTGGAATTCTCGGGTGCCAAGGAACTCCA 160302 0.3995464618508551 RNA PCR Primer, Index 1 (100% over 28bp)
TTCACAGTGGCTAAGTTCTGCTGGAATTCTCGGGTGCCAAGGAACTCCA 145432 0.362483568763294 RNA PCR Primer, Index 1 (100% over 28bp)
TGCCTATGCTGAAACCCAGAGGCTGTTTCTGAGCTGGAATTCTCGGGTG 145129 0.3617283531206894 No Hit
TGAGGTAGTAGGTTGTATAGTTGGAATTCTCGGGTGCCAAGGAACTCCA 144380 0.35986149993154454 RNA PCR Primer, Index 1 (100% over 28bp)
TTCGGAGGATGGCTCATCAAGCTTGGAATTCTCGGGTGCCAAGGAACTC 142690 0.35564924106685203 RNA PCR Primer, Index 1 (100% over 26bp)
TAGCTTATCAGACTGATGTTGTGGAATTCTCGGGTGCCAAGGAACTCCA 135586 0.33794279906994323 RNA PCR Primer, Index 1 (100% over 28bp)
TCAGTAGAAAGACAGTACCTCGCCTGGAATTCTCGGGTGCCAAGGAACT 135022 0.3365370511411346 RNA PCR Primer, Index 1 (100% over 25bp)
CAAAGAATTCTCCTTTTGGGCTTTGGAATTCTCGGGTGCCAAGGAACTC 134947 0.33635011657613345 RNA PCR Primer, Index 1 (100% over 26bp)
TGAGGTAGTAGTTTGTACAGTTTGGAATTCTCGGGTGCCAAGGAACTCC 132382 0.32995695445309414 RNA PCR Primer, Index 1 (100% over 27bp)
CTGACCTATGAATTGACAGCCTGGAATTCTCGGGTGCCAAGGAACTCCA 129341 0.3223773809575142 RNA PCR Primer, Index 1 (100% over 28bp)
CAACGGAATCCCAAAAGCAGCTGTTGGAATTCTCGGGTGCCAAGGAACT 110693 0.2758979707156286 RNA PCR Primer, Index 1 (100% over 25bp)
AGTGTTTCCTACTTTATGGATGTGGAATTCTCGGGTGCCAAGGAACTCC 103971 0.25914364876979235 RNA PCR Primer, Index 1 (100% over 27bp)
TGAGGTAGTAGATTGTATAGTTTTGGAATTCTCGGGTGCCAAGGAACTC 97784 0.24372279338763092 RNA PCR Primer, Index 1 (100% over 26bp)
TATTGCACTTGTCCCGGCCTGTATGGAATTCTCGGGTGCCAAGGAACTC 96794 0.24125525712961576 RNA PCR Primer, Index 1 (100% over 26bp)
CGACACAAGGGTTTGTTGGAATTCTCGGGTGCCAAGGAACTCCAGTCAC 96262 0.23992926794854097 RNA PCR Primer, Index 1 (100% over 33bp)
AGCTCGGTCTGAGGCCCCTCAGTTGGAATTCTCGGGTGCCAAGGAACTC 95588 0.23824934932439729 RNA PCR Primer, Index 1 (100% over 26bp)
TGTAGTGTTTCCTACTTTATGGATGGAATTCTCGGGTGCCAAGGAACTC 94806 0.23630024492665197 RNA PCR Primer, Index 1 (100% over 26bp)
ACTAGACCTAGCCCAAAGATACCCTTGGAATTCTCGGGTGCCAAGGAAC 91937 0.22914937470014138 RNA PCR Primer, Index 1 (100% over 24bp)
AACATTCAACGCTGTCGGTGAGATGGAATTCTCGGGTGCCAAGGAACTC 87529 0.21816260719980718 RNA PCR Primer, Index 1 (100% over 26bp)
GACACAAGGGTTTGTTGGAATTCTCGGGTGCCAAGGAACTCCAGTCACA 85649 0.21347678077044507 RNA PCR Primer, Index 1 (100% over 34bp)
TATTGCACTTGTCCCGGCCTGTTTGGAATTCTCGGGTGCCAAGGAACTC 85556 0.21324498190984364 RNA PCR Primer, Index 1 (100% over 26bp)
TTCGGAGGATGGCTCATCAAGATGGAATTCTCGGGTGCCAAGGAACTCC 82382 0.20533391111899504 RNA PCR Primer, Index 1 (100% over 27bp)
TTCAAGTAATTCAGGATAGGTTGGAATTCTCGGGTGCCAAGGAACTCCA 81795 0.20387083659025274 RNA PCR Primer, Index 1 (100% over 28bp)
GCCTATGCTGAAACCCAGAGGCTGTTTCTGAGCTGGAATTCTCGGGTGC 81785 0.2038459119815859 No Hit
TGTAAACATCCTACACTCTCAGCTTGGAATTCTCGGGTGCCAAGGAACT 78576 0.1958476050604034 RNA PCR Primer, Index 1 (100% over 25bp)
AACATTCAACGCTGTCGGTGAGTTTGGAATTCTCGGGTGCCAAGGAACT 78155 0.19479827903553032 RNA PCR Primer, Index 1 (100% over 25bp)
TCAGTGCACTACAGAACTTTGTCTGGAATTCTCGGGTGCCAAGGAACTC 77579 0.19336262157632148 RNA PCR Primer, Index 1 (100% over 26bp)
CATAAAGTAGAAAGCACTACTATGGAATTCTCGGGTGCCAAGGAACTCC 75533 0.18826304664309015 RNA PCR Primer, Index 1 (100% over 27bp)
CATTGCACTTGTCTCGGTCTTGGAATTCTCGGGTGCCAAGGAACTCCAG 75455 0.18806863469548893 RNA PCR Primer, Index 1 (100% over 29bp)
TAGCAGCACGTAAATATTGGTGTGGAATTCTCGGGTGCCAAGGAACTCC 74817 0.18647844466254584 RNA PCR Primer, Index 1 (100% over 27bp)
AGAGGTAAAAAATTGATTTGACTTGGAATTCTCGGGTGCCAAGGAACTC 74789 0.18640865575827875 RNA PCR Primer, Index 1 (100% over 26bp)
TGTAAACATCCTACACTCAGCTTGGAATTCTCGGGTGCCAAGGAACTCC 73210 0.1824730600497879 RNA PCR Primer, Index 1 (100% over 27bp)
TGAGGTAGTAGATTGTATAGTTATGGAATTCTCGGGTGCCAAGGAACTC 70758 0.17636154600468368 RNA PCR Primer, Index 1 (100% over 26bp)
TCTCCCAACCCTTGTACCAGTGGAATTCTCGGGTGCCAAGGAACTCCAG 70432 0.17554900376214536 RNA PCR Primer, Index 1 (100% over 29bp)
TCGAGGAGCTCACAGTCTAGTATGGAATTCTCGGGTGCCAAGGAACTCC 69251 0.17260540747859396 RNA PCR Primer, Index 1 (100% over 27bp)
TGTCTGAGCGTCGCTTGGAATTCTCGGGTGCCAAGGAACTCCAGTCACA 68714 0.17126695599318573 RNA PCR Primer, Index 1 (100% over 34bp)
CCCATAAAGTAGAAAGCACTACTGGAATTCTCGGGTGCCAAGGAACTCC 68675 0.17116975001938511 RNA PCR Primer, Index 1 (100% over 27bp)
TGTAAACATCCCCGACTGGAAGCTGGAATTCTCGGGTGCCAAGGAACTC 65460 0.16315648833300256 RNA PCR Primer, Index 1 (100% over 26bp)
CATAAAGTAGAAAGCACTACTGGAATTCTCGGGTGCCAAGGAACTCCAG 65287 0.16272529260306656 RNA PCR Primer, Index 1 (100% over 29bp)
TAGCACCATCTGAAATCGGTTTGGAATTCTCGGGTGCCAAGGAACTCCA 64978 0.16195512219526184 RNA PCR Primer, Index 1 (100% over 28bp)
TTCACAGTGGCTAAGTTCCGTGGAATTCTCGGGTGCCAAGGAACTCCAG 64775 0.16144915263932538 RNA PCR Primer, Index 1 (100% over 29bp)
TTCGGAGGATGGCTCATCAAGCTGGAATTCTCGGGTGCCAAGGAACTCC 63342 0.1578774562173701 RNA PCR Primer, Index 1 (100% over 27bp)
TGGGGGGCCCAAGTCCTTCTGATCGAGGCCTGGAATTCTCGGGTGCCAA 61462 0.15319162978800796 No Hit
TGTAAACATCCCCGACTGGATGGAATTCTCGGGTGCCAAGGAACTCCAG 58722 0.14636228701329937 RNA PCR Primer, Index 1 (100% over 29bp)
TTCACAGTGGCTAAGTTCTGCTTGGAATTCTCGGGTGCCAAGGAACTCC 58589 0.14603078971803066 RNA PCR Primer, Index 1 (100% over 27bp)
TTCAAGTAATCCAGGATAGGCATGGAATTCTCGGGTGCCAAGGAACTCC 57624 0.14362556498168252 RNA PCR Primer, Index 1 (100% over 27bp)
GCGGGTGATGCGAACTGGAGTCTGAGTTGGAATTCTCGGGTGCCAAGGA 57382 0.14302238945194548 RNA PCR Primer, Index 1 (100% over 22bp)
TATTGCACTTGTCCCGGCCTGTTTTGGAATTCTCGGGTGCCAAGGAACT 56605 0.14108574735853358 RNA PCR Primer, Index 1 (100% over 25bp)
TGAGGTAGTAGTTTGTGCTGTTATGGAATTCTCGGGTGCCAAGGAACTC 56102 0.13983203954259255 RNA PCR Primer, Index 1 (100% over 26bp)
ACTGGACTTGGAGTCAGAAGGCTGGAATTCTCGGGTGCCAAGGAACTCC 55619 0.13862818094398516 RNA PCR Primer, Index 1 (100% over 27bp)
AGCAGCATTGTACAGGGCTATGATGGAATTCTCGGGTGCCAAGGAACTC 54070 0.13476735906149478 RNA PCR Primer, Index 1 (100% over 26bp)
GTGGGGGGCCCAAGTCCTTCTGATCGAGGCCTGGAATTCTCGGGTGCCA 53638 0.13369061596708814 No Hit
CGTGGGGGGCCCAAGTCCTTCTGATCGAGGCCTGGAATTCTCGGGTGCC 52984 0.13206054656027813 No Hit
TCAGTAGAAAGACAGTACCTCGCCTTGGAATTCTCGGGTGCCAAGGAAC 52193 0.1300890100147327 RNA PCR Primer, Index 1 (100% over 24bp)
TAGCTTATCAGACTGATGTTGACATGGAATTCTCGGGTGCCAAGGAACT 52096 0.12984724131066455 RNA PCR Primer, Index 1 (100% over 25bp)
CCTGTCTGAGCGTCGCTTGGAATTCTCGGGTGCCAAGGAACTCCAGTCA 51464 0.12827200604292152 RNA PCR Primer, Index 1 (100% over 32bp)
CAAAGTGCTGTTCGTGCAGGTTGGAATTCTCGGGTGCCAAGGAACTCCA 51389 0.12808507147792036 RNA PCR Primer, Index 1 (100% over 28bp)
TGAGGTAGTAGTTTGTACAGTTGGAATTCTCGGGTGCCAAGGAACTCCA 50454 0.12575462056757272 RNA PCR Primer, Index 1 (100% over 28bp)
TAGCTTATCAGACTGATGTTGACCTGGAATTCTCGGGTGCCAAGGAACT 50267 0.1252885303855032 RNA PCR Primer, Index 1 (100% over 25bp)
CAAAGAATTCTCCTTTTGGGCTGGAATTCTCGGGTGCCAAGGAACTCCA 49287 0.12284591873615484 RNA PCR Primer, Index 1 (100% over 28bp)
ATCTGTGATGACTTACATGGAATTCTCGGGTGCCAAGGAACTCCAGTCA 48766 0.12154734662461353 RNA PCR Primer, Index 1 (100% over 32bp)
ACCCCGTGATGGAACTGAGGATCTGAGGTGGAATTCTCGGGTGCCAAGG 48394 0.12062015118220783 Illumina RNA RT Primer (100% over 21bp)
TCTCCCAACCCTTGTACCAGTGCTGGAATTCTCGGGTGCCAAGGAACTC 47609 0.11866356940186248 RNA PCR Primer, Index 1 (100% over 26bp)
TGAGGGGCAGAGAGCGAGACTTTTGGAATTCTCGGGTGCCAAGGAACTC 47369 0.11806537879385881 RNA PCR Primer, Index 1 (100% over 26bp)
TCAGTAGAAAGACAGTACCTCGTGGAATTCTCGGGTGCCAAGGAACTCC 45911 0.11443137085023647 RNA PCR Primer, Index 1 (100% over 27bp)
GCATTGGTGGTTCAGTGGTAGAATTCTCGCCTTGGAATTCTCGGGTGCC 45869 0.11432668749383583 No Hit
TCTCACACAGAAATCGCACCCATTGGAATTCTCGGGTGCCAAGGAACTC 45001 0.11216323146155587 RNA PCR Primer, Index 1 (100% over 26bp)
TAGCAGCACATAATGGTTTGTGGAATTCTCGGGTGCCAAGGAACTCCAG 44619 0.11121111141048334 RNA PCR Primer, Index 1 (100% over 29bp)
CTAGACTGAAGCTCCTTGAGGATGGAATTCTCGGGTGCCAAGGAACTCC 44519 0.11096186532381516 RNA PCR Primer, Index 1 (100% over 27bp)
TAGCACCATCTGAAATCGGTTATGGAATTCTCGGGTGCCAAGGAACTCC 44032 0.10974803688174103 RNA PCR Primer, Index 1 (100% over 27bp)
GTAGTGTTTCCTACTTTATGGATGGAATTCTCGGGTGCCAAGGAACTCC 43494 0.10840709293546613 RNA PCR Primer, Index 1 (100% over 27bp)
TTCAAGTAATTCAGGATAGGTTTTGGAATTCTCGGGTGCCAAGGAACTC 43421 0.10822514329219834 RNA PCR Primer, Index 1 (100% over 26bp)
TATTGCACTTGTCCCGGCCTGTCTTGGAATTCTCGGGTGCCAAGGAACT 42852 0.1068069330590563 RNA PCR Primer, Index 1 (100% over 25bp)
TGTAAACATCCTTGACTGGAAGCTGGAATTCTCGGGTGCCAAGGAACTC 42530 0.10600436065998471 RNA PCR Primer, Index 1 (100% over 26bp)
ATAAAGTAGAAAGCACTACTTGGAATTCTCGGGTGCCAAGGAACTCCAG 42406 0.10569529551251614 RNA PCR Primer, Index 1 (100% over 29bp)
TCTCCCAACCCTTGTACCAGTGGTGGAATTCTCGGGTGCCAAGGAACTC 42316 0.10547097403451475 RNA PCR Primer, Index 1 (100% over 26bp)
TAGCACCATCTGAAATCGGTTGGAATTCTCGGGTGCCAAGGAACTCCAG 42203 0.10518932595657969 RNA PCR Primer, Index 1 (100% over 29bp)
CAAAGTGATGATAAAGTATATCTGAGGTGGAATTCTCGGGTGCCAAGGA 41638 0.10378108556690438 RNA PCR Primer, Index 1 (100% over 22bp)
TCAGTAGAAAGACAGTACCTTGGAATTCTCGGGTGCCAAGGAACTCCAG 41518 0.10348199026290253 RNA PCR Primer, Index 1 (100% over 29bp)

[FAIL] Kmer Content

Kmer graph

Sequence Count Obs/Exp Overall Obs/Exp Max Max Obs/Exp Position
TTCTC 40707680 27.176588 407.5666 28
AATTC 41152700 26.597178 394.4163 26
ATTCT 40589315 25.83121 388.96295 27
TCTCG 40538405 24.47242 368.5207 29
TGCCA 39650430 24.308733 371.97113 36
GCCAA 37805260 23.53807 377.96317 37
CCAAG 37803310 23.536856 378.06137 38
GAACT 38827165 22.691572 354.21887 43
AACTC 32637345 22.472002 415.59634 44
GAATT 40865325 22.417856 335.39468 25
CTCGG 40464535 22.089018 333.065 30
GTGCC 38766810 21.162254 331.53226 35
GGAAT 41379275 20.52644 303.00586 24
TGGAA 40871395 20.274502 302.5574 23
CAAGG 37675565 19.910414 321.17767 39
GGAAC 36278925 19.17233 320.31348 42
AAGGA 37023760 18.65157 306.18063 40
TCGGG 40055350 18.559414 282.61993 31
CGGGT 39832970 18.456383 282.01224 32
AGGAA 36472395 18.37381 305.94672 41
GGTGC 39318185 18.217852 281.79596 34
ACTCC 24979650 18.04259 436.07053 45
GGGTG 39695060 15.611409 239.48001 33
TTGGA 21686075 10.59272 179.45154 22
CTCCA 11516855 8.318527 173.24998 45
TCCAG 9311000 5.708352 87.60993 10
CCAGT 8457245 5.184935 64.80471 17
TTCAA 7292725 4.713321 111.23712 1
CTTGG 8582790 4.397852 69.00884 21
ACTTG 6057995 3.4862103 51.1429 7
CTGGA 6697715 3.4853222 29.31626 16
GTTGG 7559260 3.2877085 50.481335 21
GTGGA 7426770 3.2803347 60.160072 22
AATCC 4707675 3.2414062 96.95901 8
ATGGA 6533295 3.2408805 43.324165 22
AAGTA 5790945 3.2262106 98.03277 4
AACAT 4849935 3.1832976 100.597374 1
CCCAA 4317980 3.1673594 78.563286 4
GCTGT 5837410 2.9911096 78.30259 11
CAACG 4679315 2.9134054 92.54436 7
TTGTA 5287735 2.8563046 63.2804 13
TCCCA 3929385 2.8381615 77.18877 3
GCACT 4562105 2.796918 55.593803 5
ATTCA 4193160 2.7100585 99.68796 4
TGTTG 5611825 2.6991467 53.154682 20
CAGTC 4387330 2.6897671 15.997286 42
TCACA 3906125 2.6895096 28.69378 2
TTTGG 5539625 2.6644204 54.826748 21
AGTAG 5256440 2.607489 66.87343 7
TCAAG 4452145 2.6019452 100.90472 2
CAAGT 4437775 2.5935473 101.20267 3
CTTGT 4499245 2.5495298 60.85122 11
AGTTG 5095885 2.489122 39.465992 21
CATTC 3623175 2.4564736 104.50774 3
AGGAT 4897440 2.429405 86.14608 13
GACTG 4573895 2.3801398 43.36399 11
TCAAC 3449025 2.3747797 103.85103 6
ACATT 3659115 2.3649027 99.27805 2
TGATG 4826900 2.3577342 40.329395 14
TCGGT 4593205 2.3535745 78.01721 15
GCTTG 4579620 2.3466136 66.88649 20
CTGTC 3874300 2.3388557 91.993996 12
GTAAT 4245080 2.3287613 95.29937 6
CCTTG 3824255 2.3086445 81.261375 10
GTAGT 4725135 2.3080263 66.59893 5
GTAGA 4614105 2.2888544 40.970108 8
ATCCA 3300350 2.2724116 96.898575 9
AGTAA 4054405 2.2587616 96.77466 5
CAGGA 4253835 2.2480252 92.89191 12
CACTT 3297215 2.2354763 60.038277 6
TCTCC 3036005 2.1592891 75.56007 1
AACGC 3408030 2.1218858 92.61467 8
TAATC 3275790 2.117158 91.059204 7
TACCA 3026190 2.0836422 73.926636 15
CAGTG 3995710 2.079267 45.367664 18
AGTCA 3526575 2.0610192 15.246397 43
ACGCT 3361720 2.0609903 91.10576 9
AACCC 2778975 2.038456 78.69692 7
GGCTT 3964415 2.0313804 73.18543 19
ACCCT 2807245 2.0276494 77.521484 8
GGATA 4085055 2.0264158 86.131386 14
CTCCC 2656090 2.0125232 80.778046 2
AGCTG 3852080 2.0045254 37.397697 2
CCAGG 3614890 2.004016 79.228714 11
ATAGG 4029935 1.9990737 86.82198 16
GATAG 4027320 1.9977766 87.449524 15
AGGCT 3760485 1.9568619 69.75205 18
CTGTT 3435510 1.9467567 58.08315 19
CGCTG 3557950 1.942235 81.24488 10
GTTTG 4024790 1.9358227 50.53088 20
AAAGC 3239265 1.9225581 42.49082 11
AAGCA 3237845 1.9217154 42.454903 12
TGTGG 4328645 1.8826344 29.123505 21
CCCTT 2574290 1.8309051 76.448746 9
GGTAG 4139785 1.8285041 60.5427 4
CAACC 2491970 1.8279299 78.6428 6
CCAAC 2489900 1.8264115 78.68633 5
ACCAG 2915850 1.8154479 66.00397 16
TGTCG 3531985 1.8098017 78.03835 13
AGAAC 3034265 1.8008873 42.850155 15
TAGTA 3238315 1.7764714 74.77659 6
TGAGG 4019620 1.7754283 60.700005 1
CTGAT 3076120 1.7702227 47.92071 13
GATGG 4003120 1.7681408 24.268036 21
GTACC 2879295 1.765227 65.882835 14
AAGCT 3016025 1.7626405 42.313572 1
GTCAC 2856515 1.751261 15.947271 44
AGCTT 3042080 1.7506335 47.254185 2
CGGTG 3759580 1.74198 70.32253 16
GTTGA 3554935 1.7364339 36.614147 18
CACTA 2511905 1.7295383 48.95229 15
GTCGG 3731455 1.728948 70.64892 14
TAGTT 3182975 1.7193655 60.228374 18
TAGGC 3293055 1.713623 71.73623 17
AGCAC 2750620 1.7125734 44.556816 13
TCTGA 2960800 1.7038591 10.238201 18
TGCAC 2761170 1.6928073 56.76358 4
AGGTA 3382355 1.6778376 69.81777 3
TGTAC 2879725 1.657203 61.7198 13
ACTGA 2771005 1.6194448 48.23557 12
ACTAC 2343070 1.6132892 48.71265 16
GAGGT 3634945 1.6055213 62.974724 2
GGTGA 3616970 1.5975816 63.511497 17
AGTGG 3586145 1.5839669 22.032543 21
ACTGG 3031565 1.5775503 28.249292 15
CTACT 2310465 1.5664703 47.705067 17
TGTAT 2850120 1.5395653 57.65959 14
TGACT 2670465 1.5367793 25.345425 20
TGAGT 3130135 1.5289371 60.47935 19
TTGAC 2638805 1.5185599 27.961906 19
ATCCC 2064695 1.4913118 59.616444 8
CAGTT 2521920 1.4512957 41.54084 8
AACTG 2456260 1.4354998 41.75663 17
GCCTG 2628150 1.4346702 38.167862 17
AGAAA 2521155 1.4264188 43.77827 9
TAGAA 2556730 1.4243876 39.989162 8
CACAC 1939905 1.4229747 12.86796 45
AGACT 2429790 1.4200304 48.439648 10
TATTG 2617990 1.4141741 39.313053 1
AGTTT 2565785 1.3859744 41.537926 19
GTGAG 3115435 1.3760586 56.89643 18
ATTGC 2379685 1.3694437 53.04219 2
TTGTC 2416325 1.3692281 50.09833 9
ATAGT 2473195 1.3567427 57.527687 17
TCCCG 2109585 1.3567412 45.74722 12
AAGAA 2386185 1.3500553 41.649803 14
GTATA 2422840 1.3291188 57.09804 15
TTGCA 2302045 1.3247637 53.135834 3
ACAGT 2250035 1.314977 22.633286 4
TCAGA 2241150 1.3097843 50.085243 8
TATAG 2373500 1.302052 56.79727 16
CTGTG 2523660 1.2931323 26.439964 21
ATTGT 2389210 1.2905929 44.87524 12
TTATC 1998760 1.2720193 52.460186 5
TACTT 1971215 1.2544895 40.121162 18
AAAGT 2250175 1.2536017 41.418888 4
CCTGT 2065150 1.2466997 40.663006 18
TATCA 1918095 1.2396736 53.286186 6
CTTAT 1907505 1.2139441 52.385323 4
CAGAC 1949025 1.2134894 51.351223 9
GCAGC 2181590 1.2094259 32.404305 17
CATAA 1827890 1.1997519 46.64994 1
ACTGT 2067625 1.1898615 40.849354 18
ACACT 1727480 1.1894331 10.21998 45
AGCAG 2238000 1.1827161 31.337078 16
ATCAG 2013650 1.1768275 48.248543 7
ATAAA 1876275 1.1739573 44.553596 2
GAAAG 2321115 1.1693152 36.311203 10
GATGT 2389820 1.1673249 40.39089 15
TCCTT 1747640 1.1667306 18.265429 9
GATTG 2388565 1.1667119 40.8948 11
GCTGG 2516720 1.1661078 11.903392 2
ATGTT 2145800 1.1591088 44.58853 16
TAGAT 2109145 1.1570325 44.783577 9
CCCGG 1982215 1.1527693 41.416943 13
CCAAA 1644355 1.1498116 41.360767 11
TTGAA 2079290 1.1406546 39.7165 11
GGCCT 2084135 1.1376998 39.055298 16
TAGCT 1976540 1.1374447 47.145046 1
GTAAA 2040330 1.1366943 33.53154 2
GTCCC 1757355 1.1302109 45.832302 11
CTGCC 1747540 1.1238985 46.397243 4
AGATT 2043765 1.1211665 44.88142 10
TTCTG 1951885 1.1060499 18.994093 16
GCTTA 1910140 1.0992334 47.3299 3
CCGGC 1853720 1.0780423 41.44397 14
TAAAG 1921830 1.0706764 39.737865 3
CGGCC 1829230 1.0638001 41.50499 15
TGGCT 2066690 1.0589793 20.14237 8
TGAAG 2093310 1.0383991 35.902187 12
ACATC 1498420 1.031717 41.498737 6
CATCC 1425895 1.0299119 43.491737 7
AGTGT 2105440 1.0284175 33.024597 19
GCCAG 1849555 1.025353 39.972855 6
TGTCC 1691510 1.0211389 41.776848 10
CAGCT 1656190 1.0153706 38.26508 18
CACAG 1622700 1.0103152 25.731703 3
AAACA 1512870 1.0084332 40.18862 4
GAGTT 2060730 1.0065786 38.18927 20
CTGAG 1927255 1.002895 5.196504 22
CAAAA 1492125 0.99460524 39.733337 12
GAATC 1666905 0.9741812 34.667366 6
TTTGT 1824430 0.97041595 17.32752 12
CCTGG 1755800 0.9584665 6.0042033 23
CTTTG 1662175 0.9418836 14.649113 17
GCTGC 1709720 0.933312 39.305313 3
TAAAC 1417105 0.93012947 39.47237 3
TCAGT 1577565 0.90784544 25.556738 1
AAAAG 1601050 0.90584177 33.70336 13
TGTAA 1641140 0.90029484 33.039387 1
TGCTG 1724860 0.88382435 8.362147 16
GAAGA 1749880 0.8815424 36.338745 13
CTTGA 1520810 0.8751844 15.727001 11
AACTT 1328680 0.85873187 16.97203 15
CGGAA 1619080 0.85563564 31.337837 4
CAGAA 1430260 0.84888333 15.470716 12
ACGGA 1568040 0.82866246 31.25443 3
CTGAA 1373870 0.80292404 6.982877 10
GCTAA 1369885 0.8005952 30.709803 10
GACTT 1380900 0.79467005 16.214052 21
ACTTT 1243645 0.7914609 16.126848 16
GTGAT 1601495 0.78226185 10.518196 5
TTTTG 1451025 0.7718015 13.478615 14
TGTTT 1435915 0.76376444 7.023934 19
ATTGG 1556315 0.76019335 10.660384 16
AAAGA 1343365 0.7600488 13.925731 2
AACGG 1419965 0.75040907 31.17679 2
TATGG 1526390 0.74557626 8.566874 22
AGGTT 1519590 0.7422548 16.25222 18
GGCTG 1594910 0.7389924 11.431142 1
CATGG 1399880 0.7284624 5.8322573 21
TAGGT 1448890 0.7077208 16.855242 17
GGTTT 1448230 0.6965621 12.265139 19
CATTG 1206405 0.6942531 11.123592 1
GTCTG 1337890 0.68553954 7.922223 17
TACAG 1152175 0.67336 13.929069 10
CCCCC 830400 0.67030925 12.0421295 1
CTCCT 941760 0.66980535 17.474194 10
GCTCA 1069985 0.6559823 14.68035 12
CAGTA 1119585 0.6543135 11.368263 13
TGTCT 1151200 0.6523359 11.138281 10
GTGTG 1499705 0.65225863 22.995226 20
ATCCT 959210 0.650334 25.055542 8
AGCTC 1058235 0.64877856 9.444058 7
GGCTA 1243225 0.64694303 20.181019 9
CAAAG 1083850 0.6432832 19.208158 1
AAGTT 1169840 0.6417495 21.325918 13
GAAGC 1212150 0.6405852 20.194534 19
GAGCT 1209285 0.6292815 7.8734484 6
AGTTC 1085995 0.6249604 22.358616 14
ATCTG 1083605 0.62358505 7.6208925 8
GCTTT 1085240 0.6149592 12.457296 20
TAGTG 1256940 0.61396146 12.076878 15
TTCAC 902830 0.61210895 26.103662 1
GACCT 984905 0.60382175 5.8164024 5
CTACA 857505 0.5904235 15.715601 9
CTTTT 926985 0.5809002 15.473328 13
CTAAG 986560 0.5765704 22.655922 11
TTCAG 1000150 0.5755589 20.2314 10
CTGTA 993955 0.5719938 16.054733 19
AATGG 1152785 0.571846 5.4692945 23
GGATG 1293350 0.5712605 10.815396 7
TAGCA 972315 0.56824535 24.073917 1
GAGGA 1265745 0.567765 10.932949 5
GGGTT 1300850 0.5657717 9.95757 19
GTTCT 995505 0.5641102 18.89158 15
TAAGT 1021775 0.5605242 21.253098 12
TAAAT 909020 0.56004775 13.858681 11
GAGTG 1241330 0.5482839 20.394796 20
CTATG 947585 0.54530925 5.4813566 4
CAGCA 870045 0.54170185 17.354572 4
TAATT 887365 0.53833145 20.002954 7
CCAGA 859960 0.5354228 13.934547 25
TGAAA 928950 0.5175301 7.6500435 11
GGTTG 1183845 0.51488334 11.833244 11
GCCCA 784825 0.51259816 6.1491904 11
TTGTT 963190 0.5123216 10.533148 19
ATTTG 937280 0.5062957 7.6193333 15
CTGCT 834850 0.50398624 8.434717 8
GTGCT 981915 0.50313675 8.25954 15
AGTGC 955715 0.49733007 13.104425 3
CCCCG 725480 0.4970673 16.024498 10
TTGAT 916950 0.49531394 14.42404 19
TGAAT 893455 0.49013054 6.859313 9
GTGTT 1012135 0.4868115 10.050445 20
GTGCA 929605 0.48374307 13.125672 4
TCCGA 787825 0.4829967 15.432999 7
CGTGG 1040825 0.4822603 8.491306 21
CCTAC 666195 0.48118702 10.460019 10
TCCCC 633710 0.48016295 17.740925 9
TTCGG 933350 0.47825184 12.502802 1
GTGGC 1029900 0.47719824 18.403814 7
TTGTG 982245 0.4724351 8.960089 13
AGAAT 847515 0.47216162 13.790335 4
GGAAG 1051165 0.47151256 18.553005 18
CTCAC 652640 0.47139636 10.738261 9
TCCTA 685925 0.46504977 9.845768 9
CATCA 673420 0.46367428 16.46744 15
ACAGA 771570 0.45793977 15.073579 11
TTATG 840730 0.45414177 5.3434386 21
TCAGG 861580 0.4483446 17.310427 11
ACCTC 618525 0.44675538 12.104811 17
ACCAT 646900 0.44541427 8.962178 5
GGCTC 815820 0.44534463 13.209257 11
TCTGT 779615 0.44177452 13.347265 17
GTTGT 917965 0.44151807 12.7835865 12
CCTAT 639620 0.4336554 7.0586314 5
CCCTG 665830 0.4282165 5.276493 2
CCTTT 638505 0.4262682 16.399998 12
CTGAC 690835 0.42353442 5.3164682 1
TCATC 622195 0.4218415 16.247152 14
GGGCT 909285 0.42131197 10.55684 18
TGACA 716420 0.41869378 5.0900273 14
GGTCT 814460 0.41733217 9.938012 16
GACAG 787615 0.416231 10.41799 11
CCCCA 540025 0.4155432 11.772494 3
GAAAT 743305 0.41410488 7.360368 12
CCGAC 632825 0.41332135 15.408611 12
GATGA 832045 0.41274095 11.227941 7
CGACT 671350 0.4115887 14.774562 13
GGTTA 840115 0.41036025 10.745193 20
TTTCC 612310 0.40878028 5.481105 8
CCCGA 624130 0.4076423 15.30648 11
CGGTC 745310 0.40685427 10.604224 15
TTACC 598400 0.4057087 14.746908 22
CACCA 552975 0.40562266 9.496179 4
CTCAT 593265 0.40222722 16.291159 13
ATCAA 611750 0.40152755 15.618418 16
CTCAG 644805 0.39531457 6.900645 18
TCGGA 755090 0.39292982 12.587066 2
GGTCC 719110 0.392552 13.803251 5
AGTAC 666455 0.38949305 11.37426 14
ACCCA 530580 0.38919532 5.602887 14
AAATC 592585 0.38894844 8.527287 13
ACTCT 568425 0.385386 5.0680933 15
ATGAA 689995 0.3844052 7.7841387 8
CTCGC 590385 0.37969536 7.61589 19
CCGAT 618520 0.37919986 13.958421 8
CATCT 555845 0.3768569 7.779803 7
TGGTA 769085 0.37566516 11.087017 12
CACGT 612660 0.37560722 13.235477 7
GTCTC 621175 0.37499386 11.768438 11
CGCCT 581705 0.37411302 6.15048 21
TTCCT 559985 0.37384793 5.4769244 9
CCCAC 485255 0.3733983 10.696043 4
CCACT 513550 0.37093282 10.026113 5
ATGGC 710610 0.36978358 12.846469 9
CTGGT 719170 0.36850524 13.188479 3
AATTT 607365 0.36846584 8.507301 14
ATGGT 752535 0.3675812 11.060751 11
GTAGG 831105 0.36709127 12.008936 8
GCACC 560515 0.366093 8.646767 3
TGGGT 841490 0.36598474 9.798947 18
CGAGG 771665 0.36310884 7.0413327 2
CACTG 590860 0.36224216 8.660286 6
CGATG 696015 0.36218873 11.93205 9
TGGAT 736925 0.35995635 5.1147423 17
TTTGA 663640 0.35848206 7.4965844 16
GCTGA 686695 0.35733882 5.1518645 8
GTCCG 652760 0.35633248 13.79922 6
AAATA 569090 0.35607114 13.80427 12
TACCT 523300 0.35479173 13.244716 16
TGGTC 687140 0.35209298 12.952395 4
CTAGA 599125 0.35014367 5.626576 2
TCGAG 672475 0.34993908 7.7974844 1
AGTCT 607075 0.34935507 9.249712 14
ACCTA 506865 0.34899506 6.42725 6
AAATT 565935 0.3486729 8.628181 13
CACTC 481365 0.34768587 6.6375675 14
AGACA 570445 0.33856872 11.728731 10
AAGAC 567675 0.33692464 11.677253 9
CTGGC 613570 0.3349392 7.4163923 21
GTGGG 849230 0.3339881 8.858638 17
AATTG 607635 0.33333573 7.549766 11
TCGCC 507315 0.3262704 6.281285 20
ATTGA 591265 0.3243555 7.5471754 12
ATATT 534145 0.324046 13.08192 14
TTGGG 744640 0.32386225 11.089836 16
CGGAG 687620 0.32356125 11.357299 3
AATAT 524315 0.32303077 13.277452 13
AGTGA 649545 0.32221073 5.4277983 19
ACTGC 523710 0.3210741 8.556553 7
TGGGC 688910 0.31920248 11.474445 17
GTTAC 545670 0.31401816 12.556838 21
CGTAA 531640 0.31070378 12.600956 9
GTTTT 583895 0.31057426 5.476039 20
AAGTG 625070 0.31006974 5.289792 3
CTTTA 487220 0.31006885 5.1421237 15
GCACG 552135 0.3060916 12.003943 6
AATCG 514195 0.30050847 7.385208 14
TGACC 487855 0.29909223 5.3270874 2
GTACA 507750 0.2967418 6.041786 15
ACGTA 500135 0.2922914 12.60734 8
CCTCG 444280 0.2857306 9.57673 18
CCATC 395250 0.28548574 8.150192 6
GTCTA 490325 0.28216857 9.156525 15
GGAGC 595965 0.28043273 7.0321064 5
TACCC 387830 0.28012633 5.058625 20
TAGAC 478335 0.279551 5.550531 3
ATCGG 526425 0.27393833 6.5710516 15
ATGAC 464615 0.27153268 6.00781 8
AAACC 388235 0.27147248 5.367658 12
TGCTA 468505 0.26961178 7.964696 9
GGAGG 674355 0.2693385 9.7007065 4
TGTGC 522120 0.26753616 8.205897 14
TCTGC 440360 0.26583862 6.910525 17
ACTAG 450390 0.2632192 5.588315 1
ATACC 380445 0.26195028 5.199619 19
AGCCC 394220 0.25747958 7.010032 10
TTGGC 502460 0.25746226 8.585473 17
CTAAA 389715 0.25579292 9.113858 11
GCTCC 397705 0.25577676 5.6247997 11
CTAGT 444380 0.2557285 8.085503 17
GTTAT 471295 0.25458205 5.3910785 20
TCTAG 427310 0.24590519 8.436245 16
AGACC 390005 0.24282244 5.91118 4
GTATT 447830 0.24190679 6.386944 21
AAGAT 428520 0.23873405 5.3664737 16
GCGTG 499350 0.23137097 7.199864 20
AGGAG 511515 0.22944616 6.691521 4
GGCGT 473355 0.21932632 7.5538244 19
ACAGC 332260 0.2068696 5.275426 16
TGGCG 440135 0.20393403 7.195727 18
CAGCC 311940 0.2037395 5.207825 17
TCCCT 279180 0.19856042 5.358749 1
CCCCT 261665 0.19826394 5.039838 15
CTAGC 321035 0.1968189 5.7245083 8
CGGTT 365295 0.18717848 5.933397 17
CAAGC 282965 0.17617787 6.694628 18
TAGCC 263400 0.16148426 5.7330875 9
CCTAG 262520 0.16094474 5.7307153 7
TACAC 232640 0.16018113 6.2279453 12